Package: adaptMT 1.0.0

adaptMT: Adaptive P-Value Thresholding for Multiple Hypothesis Testing with Side Information

Implementation of adaptive p-value thresholding (AdaPT), including both a framework that allows the user to specify any algorithm to learn local false discovery rate and a pool of convenient functions that implement specific algorithms. See Lei, Lihua and Fithian, William (2016) <arxiv:1609.06035>.

Authors:Lihua Lei [aut, cre]

adaptMT_1.0.0.tar.gz
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adaptMT.pdf |adaptMT.html✨
adaptMT/json (API)
NEWS

# Install 'adaptMT' in R:
install.packages('adaptMT', repos = c('https://lihualei71.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/lihualei71/adaptmt/issues

Datasets:

On CRAN:

5.28 score 8 stars 48 scripts 214 downloads 1 mentions 14 exports 0 dependencies

Last updated 3 years agofrom:d912b9f7b4. Checks:OK: 3 NOTE: 4. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 01 2024
R-4.5-winNOTENov 01 2024
R-4.5-linuxNOTENov 01 2024
R-4.4-winNOTENov 01 2024
R-4.4-macNOTENov 01 2024
R-4.3-winOKNov 01 2024
R-4.3-macOKNov 01 2024

Exports:adaptadapt_gamadapt_glmadapt_glmnetbeta_familycorr_lfdrctgm_lfdrgen_adapt_modelgen_exp_familyinv_gaussian_familyplot_1d_lfdrplot_1d_threshplot_2d_lfdrplot_2d_thresh

Dependencies:

Introduction to adaptMT package

Lihua Lei

Rendered fromadapt_demo.Rmdusingknitr::rmarkdownon Nov 01 2024.

Last update: 2018-07-24
Started: 2018-07-21